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Design mat fsl.
Designmat path to the design.
This can be handy if you would like to base your analsis on that of an existing one but need to make some changes to the design.
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Returns a numpy array containing the design matrix data where the first dimension corresponds to the data points and the second to the evs.
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This can be handy if you would like to base your analsis on that of an existing one but need to make some changes to the design.
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Converting design matrix files to plain text.
Fsl also comes with another tool vest2text which will convert your design mat design con and design fts files into plain text.
A list of ev instances one for each column in the design matrix.
Design mat and design con are text files containing the design matrix and list of contrasts required.
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Note that because the concatenated bvars files was created in the order.
Fsl data featdesign loaddesignmat designmat source loads the specified design matrix.
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Fsl also comes with another tool vest2text which will convert your design mat design con and design fts files into plain text.
They follow the same format as generated by feat see below for examples.
Create this design using the glm gui and specify both a single t contrast and single f contrast and then save them in files named con1 dis2 choose the name con1 dis2 in the save dialog of the glm gui it will produce con1 dis2 mat con1 dis2 con and con1 dis2 fts.
The n 500 option tells randomise to generate 500 permutations of the data when building up the null distribution to test against.
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